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 application ontology


MaterioMiner -- An ontology-based text mining dataset for extraction of process-structure-property entities

Durmaz, Ali Riza, Thomas, Akhil, Mishra, Lokesh, Murthy, Rachana Niranjan, Straub, Thomas

arXiv.org Artificial Intelligence

While large language models learn sound statistical representations of the language and information therein, ontologies are symbolic knowledge representations that can complement the former ideally. Research at this critical intersection relies on datasets that intertwine ontologies and text corpora to enable training and comprehensive benchmarking of neurosymbolic models. We present the MaterioMiner dataset and the linked materials mechanics ontology where ontological concepts from the mechanics of materials domain are associated with textual entities within the literature corpus. Another distinctive feature of the dataset is its eminently fine-granular annotation. Specifically, 179 distinct classes are manually annotated by three raters within four publications, amounting to a total of 2191 entities that were annotated and curated. Conceptual work is presented for the symbolic representation of causal composition-process-microstructure-property relationships. We explore the annotation consistency between the three raters and perform fine-tuning of pre-trained models to showcase the feasibility of named-entity recognition model training. Reusing the dataset can foster training and benchmarking of materials language models, automated ontology construction, and knowledge graph generation from textual data.


Toward Semantic Interoperability of Electronic Health Records

Berges, Idoia, Bermúdez, Jesús, Illarramendi, Arantza

arXiv.org Artificial Intelligence

Although the goal of achieving semantic interoperability of electronic health records (EHRs) is pursued by many researchers, it has not been accomplished yet. In this paper, we present a proposal that smoothes out the way toward the achievement of that goal. In particular, our study focuses on medical diagnoses statements. In summary, the main contributions of our ontology-based proposal are the following: first, it includes a canonical ontology whose EHR-related terms focus on semantic aspects. As a result, their descriptions are independent of languages and technology aspects used in different organizations to represent EHRs. Moreover, those terms are related to their corresponding codes in well-known medical terminologies. Second, it deals with modules that allow obtaining rich ontological representations of EHR information managed by proprietary models of health information systems. The features of one specific module are shown as reference. Third, it considers the necessary mapping axioms between ontological terms enhanced with so-called path mappings. This feature smoothes out structural differences between heterogeneous EHR representations, allowing proper alignment of information.


Data Interpretation Support in Rescue Operations: Application for French Firefighters

Chehade, Samer, Matta, Nada, Pothin, Jean-Baptiste, Cogranne, Rémi

arXiv.org Artificial Intelligence

--This work aims at developing a system that supports French firefighters in data interpretation during rescue operations. An application ontology is proposed based on existing crisis management ones and operational expertise collection. After that, a knowledge-based system will be developed and integrated in firefighters' environment. Our first studies are shown in this paper. Rescue of people consists in saving their life in case of distress situations by applying responsive operations. In France, it is defined as specific tasks to be accomplished by public services in order to ensure the safety of patients and victims by making them able to escape from dangers, securing intervention sites, providing medical help, and finally, ensuring the evacuation to an appropriate place of reception [1].


Semantic Integration Through Invariants

AI Magazine

A semantics-preserving exchange of information between two software applications requires mappings between logically equivalent concepts in the ontology of each application. The challenge of semantic integration is therefore equivalent to the problem of generating such mappings, determining that they are correct, and providing a vehicle for executing the mappings, thus translating terms from one ontology into another. This article presents an approach toward this goal using techniques that exploit the model-theoretic structures underlying ontologies. With these as inputs, semiautomated and automated components may be used to create mappings between ontologies and perform translations. A major barrier to such interoperability is semantic heterogeneity: different applications, databases, and agents may ascribe disparate meanings to the same terms or use distinct terms to convey the same meaning.


Semantic Integration through Invariants

Gruninger, Michael, Kopena, Joseph B.

AI Magazine

A semantics-preserving exchange of information between two software applications requires mappings between logically equivalent concepts in the ontology of each application. The challenge of semantic integration is therefore equivalent to the problem of generating such mappings, determining that they are correct, and providing a vehicle for executing the mappings, thus translating terms from one ontology into another. This article presents an approach toward this goal using techniques that exploit the model-theoretic structures underlying ontologies. With these as inputs, semiautomated and automated components may be used to create mappings between ontologies and perform translations.